Information and communication technology has profoundly changed the logic of urban spatial organization and nurtured a series of new spaces. But there is a lack of systematic and detailed theoretical explanations for this phenomenon. This paper, grounded in the space of flows, proposes a perspective of integrated flows of virtual and physical elements, arguing that the respective advantages of virtual and physical spaces form the basis for their integrated flows. In this process of integration, the virtuality has an empowering and derivative effect on the reality; The reality generates materialization and ontological effects on the virtuality. Virtual and physical elements, existing in two distinct spatial dimensions, should undergo transformation to couple and complete the loop of activities. From the perspective of integrated flows, this paper defines the subjects of this flow as virtual-physical substances, services, communications, and people that are mutually mapped in both virtual and physical spaces. It explores two modes of conversion: from physical to virtual and from virtual to physical, with the latter is more likely to stimulate the creation of new spaces and places. The transformation and connection of virtual and physical elements will give rise to hybrid conversion spaces, which serve as hubs for the concentration of access and egress between virtual and physical spaces, and interprets a series of typical cases. Finally, the paper summarizes a series of changes in physical spaces caused by these hybrid conversion, including hybrid conversion locations, hybrid conversion centers, as well as the trends of discretization, flattening, and unit miniaturization of urban-rural spatial structure, thus demonstrating the practical utility of this perspective. The research findings contribute to enriching and deepening the understanding of the interaction mechanisms between virtual and physical spaces in the information age, providing a holistic explanation for the emergence of new spaces, and grasping future changes in urban and rural spaces, thus holding theoretical value.